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Alberto Noronha

Alberto Noronha
Postadresse Université du Luxembourg
2, Avenue de l'Université
L-4365 Esch-sur-Alzette

Postdoc in the Molecular Systems Physiology group (Thiele Lab)

Last updated on: Donnerstag, den 15. März 2018

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2019

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See detailCreation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0.
Heirendt, Laurent; Arreckx, Sylvain; Pfau, Thomas; Mendoza, Sebastian N.; Richelle, Anne; Heinken, Almut Katrin; Haraldsdottir, Hulda S.; Wachowiak, Jacek; Keating, Sarah M.; Vlasov, Vanja; Magnusdottir, Stefania; Ng, Chiam Yu; Preciat, German; Zagare, Alise; Chan, Siu H. J.; Aurich, Maike K.; Clancy, Catherine M.; Modamio, Jennifer; Sauls, John T.; Noronha, Alberto; Bordbar, Aarash; Cousins, Benjamin; El Assal, Diana Charles; Valcarcel, Luis V.; Apaolaza, Inigo; Ghaderi, Susan; Ahookhosh, Masoud; Ben Guebila, Marouen; Kostromins, Andrejs; Sompairac, Nicolas; Le, Hoai M.; Ma, Ding; Sun, Yuekai; Wang, Lin; Yurkovich, James T.; Oliveira, Miguel A. P.; Vuong, Phan T.; El Assal, Lemmer P.; Kuperstein, Inna; Zinovyev, Andrei; Hinton, H. Scott; Bryant, William A.; Aragon Artacho, Francisco J.; Planes, Francisco J.; Stalidzans, Egils; Maass, Alejandro; Vempala, Santosh; Hucka, Michael; Saunders, Michael A.; Maranas, Costas D.; Lewis, Nathan E.; Sauter, Thomas; Palsson, Bernhard O.; Thiele, Ines; Fleming, Ronan M. T.

in Nature protocols (2019), 14(3), 639-702

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2018

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See detailRecon3D enables a three-dimensional view of gene variation in human metabolism.
Brunk, Elizabeth; Sahoo, Swagatika; Zielinski, Daniel C.; Altunkaya, Ali; Drager, Andreas; Mih, Nathan; Gatto, Francesco; Nilsson, Avlant; Preciat Gonzalez, German Andres; Aurich, Maike Kathrin; Prlic, Andreas; Sastry, Anand; Danielsdottir, Anna D.; Heinken, Almut Katrin; Noronha, Alberto; Rose, Peter W.; Burley, Stephen K.; Fleming, Ronan MT; Nielsen, Jens; Thiele, Ines; Palsson, Bernhard O.

in Nature biotechnology (2018), 36(3), 272-281

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See detailThe Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease
Noronha, Alberto; Modamio Chamarro, Jennifer; Jarosz, Yohan; Guerard, Elisabeth; Sompairac, Nicolas; Preciat Gonzalez, German Andres; Danielsdottir, Anna Dröfn; Krecke, Max; Merten, Diane; Haraldsdottir, Hulda; Heinken, Almut Katrin; Heirendt, Laurent; Magnusdottir, Stefania; Ravcheev, Dmitry; Sahoo, Swagatika; Gawron, Piotr; Friscioni, Lucia; Garcia Santa Cruz, Beatriz; Prendergast, Mabel; Puente, Alberto; Rodrigues, Mariana; Roy, Akansha; Mouss, Rouquaya; Wiltgen, Luca; Zagare, Alise; John, Elisabeth; Krüger, Maren; Kuperstein, Inna; Zinovyev, Andrei; Schneider, Reinhard; Fleming, Ronan MT; Thiele, Ines

in Nucleic Acids Research (2018)

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2017

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See detailComparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D
Preciat Gonzalez, German Andres; El Assal, Lemmer; Noronha, Alberto; Thiele, Ines; Haraldsdottir, Hulda; Fleming, Ronan MT

in Journal of Cheminformatics (2017)

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See detailLeigh Map: A Novel Computational Diagnostic Resource for Mitochondrial Disease
Rhaman, Joyeeta; Noronha, Alberto; Thiele, Ines; Rahman, Shamima

in Annals of Neurology (2017)

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2016

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See detailGeneration of genome-scale metabolic reconstructions for 773 members of the human gut microbiota
Magnusdottir, Stefania; Heinken, Almut Katrin; Kutt, Laura; Ravcheev, Dmitry; Bauer, Eugen; Noronha, Alberto; Greenhalgh, Kacy; Jäger, Christian; Baginska, Joanna; Wilmes, Paul; Fleming, Ronan MT; Thiele, Ines

in Nature Biotechnology (2016)

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See detailReconMap: An interactive visualisation of human metabolism
Noronha, Alberto; Danielsdóttir, Anna Dröfn; Jóhannsson, Freyr; Jónsdóttir, Soffia; Jarlsson, Sindri; Gunnarsson, Jón Pétur; Brynjólfsson, Sigurður; Gawron, Piotr; Schneider, Reinhard; Thiele, Ines; Fleming, Ronan MT

in Bioinformatics (2016)

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2015

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See detailDo Genome-scale Models Need Exact Solvers or Clearer Standards?
Ebrahim, Ali; Almaas, Eivind; Bauer, Eugen; Bordbar, Aarash; Burgard, Anthony P.; Chang, Roger L.; Dräger, Andreas; Famili, Iman; Feist, Adam M.; Fleming, Ronan MT; Fong, Stephen S.; Hatzimanikatis, Vassily; Herrgård, Markus J.; Holder, Allen; Hucka, Michael; Hyduke, Daniel; Jamshidi, Neema; Lee, Sang Yup; Le Novère, Nicolas; Lerman, Joshua A.; Lewis, Nathan E.; Ma, Ding; Mahadevan, Radhakrishnan; Maranas, Costas; Nagarajan, Harish; Navid, Ali; Nielsen, Jens; Nielsen, Lars K.; Nogales, Juan; Noronha, Alberto; Pal, Csaba; Palsson, Bernhard O.; Papin, Jason A.; Patil, Kiran R.; Price, Nathan D.; Reed, Jennifer L.; Saunders, Michael; Senger, Ryan S.; Sonnenschein, Nikolaus; Sun, Yuekai; Thiele, Ines

in Molecular Systems Biology (2015), 11(10), 1

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2014

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See detailAn integrated network visualization framework towards metabolic engineering applications
Noronha, Alberto; Vilaça, Paulo; Rocha, Miguel

in BMC Bioinformatics (2014), 15

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2013

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See detailNetwork Visualization Tools to Enhance Metabolic Engineering Platforms
Noronha, Alberto; Vilaça, Paulo; Rocha, Miguel

in 7th International Conference on Practical Applications of Computational Biology & Bioinformatics (2013)

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